LONG COVID -Hearing impairment

Hearing impairment (HP:0000365)

A decreased magnitude of the sensory perception of sound.

Synonyms:    Deafness, Hearing defect, Hearing impairment, Hearing loss, Hypacusis, Hypoacusis

Comment:    Hearing loss can be categorized by which part of the auditory system is damaged, as conductive hearing loss, sensorineural hearing loss, and mixed hearing loss. Another axis of classification uses the degree of hearing impairment. The degree of hearing loss is computed by using a three frequency average taken at 500 Hz, 1,000 Hz and 2,000 Hz. The average of these three frequencies is called the Pure Tone Average (PTA). 0-20 dB is considered normal, 21-40 dB mild loss, 41-60 dB moderate loss, 61-70 dB moderately severe loss,71-90 dB severe loss, and greater than 90 dB profound loss. Note that the word deafness is occasionally used to describe partial hearing loss. The World Health Organization uses the word deafness to refer to complete loss of the ability to hear, and hearing impairment to refer to any degree of reduced hearing.

KEGG Pathway

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1Phototransduction0.000084460.0005068191.961800.45
2Retinol metabolism0.033490.0940133.04112.22
3Drug metabolism0.052720.0940120.6560.76
4Purine metabolism0.062670.0940117.2447.76
5cGMP-PKG signaling pathway0.080450.0965413.2733.44

GO: Biological Process

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1protein localization to ciliary transition zone (GO:1904491)0.0029970.02240444.112580.41
2protein localization to non-motile cilium (GO:0097499)0.0029970.02240444.112580.41
3visual perception (GO:0007601)9.004e-80.000002895149.072418.38
4sensory perception of light stimulus (GO:0050953)9.813e-80.000002895145.782352.45
5regulation of rhodopsin mediated signaling pathway (GO:0022400)0.000067090.001319217.032085.58

GO: Molecular Function

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1guanylate cyclase activator activity (GO:0030250)0.0024980.01921555.173326.77
2NADP-retinol dehydrogenase activity (GO:0052650)0.0029970.01921444.112580.41
3intracellular cGMP-activated cation channel activity (GO:0005223)0.0034950.01921370.072093.27
4intracellular cAMP-activated cation channel activity (GO:0005222)0.0044920.01921277.531500.17
5leucine zipper domain binding (GO:0043522)0.0049900.01921246.681307.49

GO: Cellular Component

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1sperm flagellum (GO:0036126)0.025700.176643.44159.04
29+2 motile cilium (GO:0097729)0.028140.176639.55141.22
3azurophil granule lumen (GO:0035578)0.044110.176624.8577.54
4cytoplasmic vesicle lumen (GO:0060205)0.056050.176619.3755.82
5ficolin-1-rich granule lumen (GO:1904813)0.059840.176618.0950.96

Hub genes predicted as biomarkers & predicted FDA approved drugs

Hub Genes (ranked)FDA-Approved Drugs
RPGR
IMPDH1MYCOPHENOLATE MOFETIL HYDROCHLORIDE, RIBAVIRIN, MYCOPHENOLATE MOFETIL, MYCOPHENOLIC ACID
RDH12
SPATA7
CRX
PRPH2
TULP1
CNGA1DEQUALINIUM
NR2E3
GUCA1B