Long COVID – Somatic sensory dysfunction

Somatic sensory dysfunction (HP:0003474)

An abnormality of the primary sensation that is mediated by peripheral nerves (pain, temperature, touch, vibration, joint position). The word hypoesthesia (or hypesthesia) refers to a reduction in cutaneous sensation to a specific type of testing.

Synonyms:    Sensory impairment

Comment:    This term does not include abnormalities of cortical sensation such as two-point discrimination, stereognosis, and graphesthesia.

Cross References:    MSH:D006987, SNOMEDCT_US:397974008, SNOMEDCT_US:398026008, SNOMEDCT_US:59073000, UMLS:C0020580

KEGG Pathway

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1Non-small cell lung cancer0.035430.129931.17104.12
2Amyotrophic lateral sclerosis0.013500.122813.5658.36
3Dopaminergic synapse0.064090.157016.8446.28
4Cell adhesion molecules0.071600.157015.0039.55
5Pathways of neurodegeneration0.022330.122810.3239.22

GO: Biological Process

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1synaptic vesicle transport (GO:0048489)0.000012350.0006828555.036273.06
2synaptic vesicle localization (GO:0097479)0.000017500.0006828454.074973.59
3endoplasmic reticulum tubular network organization (GO:0071786)0.000023540.0006828384.174094.01
4anterograde dendritic transport (GO:0098937)0.0024980.01672555.173326.77
5anterograde dendritic transport of neurotransmitter receptor complex (GO:0098971)0.0024980.01672555.173326.77

GO: Molecular Function

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1olfactory receptor binding (GO:0031849)0.0029970.01299444.112580.41
2microtubule binding (GO:0008017)0.00017410.00226336.98320.12
3alpha-tubulin binding (GO:0043014)0.015400.0344373.93308.54
4beta-tubulin binding (GO:0048487)0.015890.0344371.54296.32
5tubulin binding (GO:0015631)0.00039680.00257927.75217.37

GO: Cellular Component

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1endoplasmic reticulum tubular network membrane (GO:0098826)0.0024980.01748555.173326.77
2endoplasmic reticulum tubular network (GO:0071782)0.000056610.001585237.732324.81
3Golgi cis cisterna (GO:0000137)0.012430.0386892.44405.55
4intrinsic component of endoplasmic reticulum membrane (GO:0031227)0.0015830.0174841.75269.21
5integral component of endoplasmic reticulum membrane (GO:0030176)0.0021700.0174835.45217.39

Hub genes predicted as biomarkers & predicted FDA approved drugs

Hub Genes (ranked)FDA-Approved Drugs
BSCL2
REEP1
KIF5A
SPG11
NIPA1
KIAA0196
RTN2
SPAST
ATL1              
MPZ