Long COVID – Confusion

Confusion (HP:0001289)

Lack of clarity and coherence of thought, perception, understanding, or action.

Synonyms:    Confusion, Disorientation, Easily confused, Mental disorientation

Cross References:    MSH:D003221, SNOMEDCT_US:286933003, UMLS:C0009676

KEGG Pathway

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1Nucleotide excision repair0.0000014430.00001443194.282612.86
2Arginine biosynthesis0.010950.03979105.66476.99
3Vitamin digestion and absorption0.011940.0397996.46427.12
4Basal transcription factors0.022280.0533650.37191.61
5Fanconi anemia pathway0.026680.0533641.80151.46

GO: Biological Process

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1nucleotide-excision repair, DNA incision, 3′-to lesion (GO:0006295)1.191e-70.000009233475.527581.26
2nucleotide-excision repair, preincision complex stabilization (GO:0006293)1.191e-70.000009233475.527581.26
3negative regulation of telomerase activity (GO:0051974)0.000010100.0002610624.447182.69
4urea cycle (GO:0000050)0.000010100.0002610624.447182.69
5UV protection (GO:0009650)0.000010100.0002610624.447182.69

GO: Molecular Function

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1deoxyribonuclease activity (GO:0004536)0.000020410.0005613416.214494.85
2oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor (GO:0016723)0.0024980.01249555.173326.77
3L-ornithine transmembrane transporter activity (GO:0000064)0.0024980.01249555.173326.77
4Y-form DNA binding (GO:0000403)0.0024980.01249555.173326.77
5apolipoprotein A-I binding (GO:0034186)0.0024980.01249555.173326.77

GO: Cellular Component

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1transcription factor TFIIH core complex (GO:0000439)0.0049900.04870246.681307.49
2transcription factor TFIIH holo complex (GO:0005675)0.0059850.04870201.811032.95
3acetylcholine-gated channel complex (GO:0005892)0.0069790.04870170.74847.70
4voltage-gated sodium channel complex (GO:0001518)0.0084690.04870138.71661.82
5sodium channel complex (GO:0034706)0.012430.0570692.44405.55

Hub genes predicted as biomarkers & predicted FDA approved drugs

Hub Genes (ranked)FDA-Approved Drugs
ERCC4
ERCC2OXALIPLATIN, LEUCOVORIN
NAGS
SCN1AETHOSUXIMIDE
SLC25A15
ERCC5
MEN1OLSALAZINE
MMACHC
CHRNA2PIPECURONIUM, METOCURINE, CISATRACURIUM, PANCURONIUM, MECAMYLAMINE, DOXACURIUM, MIVACURIUM, DECAMETHONIUM, VECURONIUM, TUBOCURARINE
TREM2