LONG COVID – Elevated circulating alanine aminotransferase concentration

Elevated circulating alanine aminotransferase concentration (HP:0031964)

An abnormally high concentration in the circulation of alanine aminotransferase (ALT).

Synonyms:    Elevated serum ALT, Alanine aminotransferase increased, Elevated serum alanine aminotransferase, Elevated serum glutamic-pyruvic transaminase

Comment:    Alanine aminotransferase (ALT) is an enzyme that catalyzes the transfer of amino groups to form the hepatic metabolite oxaloacetate. ALT is found abundantly in the cytosol of the hepatocyte. ALT activity in the liver is about 3000 times that of serum activity. Thus, in the case of hepatocellular injury or death, release of ALT from damaged liver cells increases measured ALT activity in the serum. Although it is generally thought to be specific to the liver, it is also found in the kidney, and, in much smaller quantities, in heart and skeletal muscle cells.

Pubmed References:    PMID:18366115

KEGG Pathway

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1Taurine and hypotaurine metabolism0.0054880.03490222.001155.57
2Bile secretion0.000010340.000134498.041125.55
3Primary bile acid biosynthesis0.0084690.03490138.71661.82
4Maturity onset diabetes of the young0.012930.0349088.73385.85
5Biosynthesis of unsaturated fatty acids0.013420.0349085.32367.79

GO: Biological Process

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1bile acid secretion (GO:0032782)0.0024980.03435555.173326.77
2fructose transmembrane transport (GO:0015755)0.0024980.03435555.173326.77
3dehydroascorbic acid transport (GO:0070837)0.0029970.03435444.112580.41
4cellular triglyceride homeostasis (GO:0035356)0.0029970.03435444.112580.41
5positive regulation of protein glycosylation (GO:0060050)0.0029970.03435444.112580.41

GO: Molecular Function

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1fructose transmembrane transporter activity (GO:0005353)0.0024980.02631555.173326.77
2dehydroascorbic acid transmembrane transporter activity (GO:0033300)0.0029970.02631444.112580.41
3L-aspartate transmembrane transporter activity (GO:0015183)0.0044920.02631277.531500.17
4bile acid binding (GO:0032052)0.0044920.02631277.531500.17
5L-glutamate transmembrane transporter activity (GO:0005313)0.0069790.02631170.74847.70

GO: Cellular Component

IndexNameP-valueAdjusted p-valueOdds RatioCombined score
1anchored component of external side of plasma membrane (GO:0031362)0.0099570.05883116.79538.34
2intrinsic component of external side of plasma membrane (GO:0031233)0.011940.0588396.46427.12
3myofibril (GO:0030016)0.013420.0588385.32367.79
4intrinsic component of mitochondrial inner membrane (GO:0031304)0.019330.0588358.34230.20
5anchored component of plasma membrane (GO:0046658)0.022770.0588349.25186.27

Hub genes predicted as biomarkers & predicted FDA approved drugs

Hub Genes (ranked)FDA-Approved Drugs
NR1H4OBETICHOLIC ACID, CHENODIOL
BAAT
SLC51B
SLC2A2METFORMIN
SLC25A13
SCO1
DAK
TTC26
KIF12
PKHD1